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nf-core/ampliseq

Amplicon sequencing analysis workflow using DADA2 and QIIME2

16s18samplicon-sequencingednailluminaiontorrentitsmetabarcodingmetagenomicsmicrobiomepacbioqiime2rrnataxonomic-classificationtaxonomic-profiling
These pages are for an old version of the pipeline (2.6.0). The latest stable release is 2.13.0 .
Launch version 2.6.0 https://github.com/nf-core/ampliseq
  • Introduction
  • Usage
  • Parameters
  • Output
  • Results
  • Releases
    • 2.13.0
    • 2.12.0
    • 2.11.0
    • 2.10.0
    • 2.9.0
    • 2.8.0
    • 2.7.1
    • 2.7.0
    • 2.6.1
    • 2.6.0
    • 2.5.0
    • 2.4.1
    • 2.4.0
    • 2.3.2
    • 2.3.1
    • 2.3.0
    • 2.2.0
    • 2.1.1
    • 2.1.0
    • 2.0.0
    • 1.2.0
    • 1.1.3
    • 1.1.2
    • 1.1.1
    • 1.1.0
    • 1.0.0
    • dev
Introduction Usage Parameters Output Results Releases
  • 2.13.0
  • 2.12.0
  • 2.11.0
  • 2.10.0
  • 2.9.0
  • 2.8.0
  • 2.7.1
  • 2.7.0
  • 2.6.1
  • 2.6.0
  • 2.5.0
  • 2.4.1
  • 2.4.0
  • 2.3.2
  • 2.3.1
  • 2.3.0
  • 2.2.0
  • 2.1.1
  • 2.1.0
  • 2.0.0
  • 1.2.0
  • 1.1.3
  • 1.1.2
  • 1.1.1
  • 1.1.0
  • 1.0.0
  • dev
  1. nf-core-awsmegatests
  2. ampliseq
  3. results-9ac22bac93ffdf859da6bda751112ec0932892eb/
  • Name Last Modified Size
  • cutadapt/ dada2/ fastqc/ input/ pipeline_info/ qiime2/
    Making awesome workflows since 2018.

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    See the source code for this website on GitHub:
    https://github.com/nf-core/website